shopify integration with QuickBooks Online

Streamlining E-commerce Accounting: Integrating Shopify with QuickBooks Online

The world of e-commerce moves fast. You need to keep up with orders, inventory, and of course, accounting. Wouldn’t it be great if your online store and accounting software could work together seamlessly? That’s where integrating Shopify with QuickBooks Online comes in.

Picture this: every sale made on your Shopify store automatically flows into QuickBooks. No more manual data entry, no more errors. Your sales and accounting teams can work in harmony, saving time and reducing headaches.

Let’s take a look at how this integration can transform your business.

Real-World Scenario: Sarah’s Online Store Struggles

Sarah runs a thriving online store selling handmade jewelry. As her business grew, so did the challenges of keeping her books in order. Each day, she would manually enter Shopify sales into QuickBooks Online. It was time-consuming and prone to errors.

When it came time to reconcile her accounts, Sarah spent hours cross-checking transactions, hunting down missing entries, and eliminating duplicates. It was a nightmare.

Then Sarah discovered the power of integrating Shopify with QuickBooks Online. Suddenly, her sales data flowed automatically into her accounting software. No more manual entry, no more errors.

To further streamline her operations, Sarah integrated:

Challenges Solved by Integrating Shopify and QuickBooks Online

The integration addressed several key challenges:

  1. Eliminated manual data entry: No more typing sales data into QuickBooks.
  2. Reduced errors: Automated data sync means fewer human errors.
  3. Saved time: Sarah now spends less time on bookkeeping and more on growing her business.
  4. Improved data accuracy: Real-time, synchronized data ensures accuracy across systems.
  5. Simplified reconciliation: Transactions match up perfectly, making reconciliation a breeze.

Benefits of Shopify and QuickBooks Online Integration

Integrating these two powerful platforms offers significant benefits:

  • Streamlined accounting processes
  • Real-time financial data at your fingertips
  • Improved accuracy and reduced errors
  • Increased productivity and efficiency
  • Better visibility into your business’s financial health

Integration Options

There are several ways to integrate Shopify with QuickBooks Online:

  1. Native Integration: Shopify offers a built-in QuickBooks Online connector.
  2. Third-Party Apps: Various apps on the Shopify App Store can handle the integration.
  3. Custom Development: For unique needs, you can develop a custom integration solution.
OptionEase of UseCostFeaturesSupportSecurity
Native IntegrationHighLowLimitedGoodHigh
Third-Party AppsMediumMediumVariedVariedHigh
Custom DevelopmentLowHighTailoredVariedHigh

Integration Guide


  1. Ensure you have active Shopify and QuickBooks Online accounts.
  2. Back up your existing financial data.
  3. Set up the necessary user permissions in both systems.


  1. Choose your integration method (native, third-party app, or custom).
  2. Configure the connection settings, such as data mapping and sync frequency.
  3. Test the integration thoroughly.
Permissions RequiredIntegration OptionsTotal Cost
– Shopify Admin
– QuickBooks Company Admin
– Native (free)
– Third-Party App ($50-$500)
– Custom (variable)
– Native: $0
– Third-Party: $50-$500
– Custom: $1,000+

Here’s a step-by-step guide for integrating using the Shopify API and QuickBooks API:

  1. Obtain API credentials from Shopify and QuickBooks.
  2. Install the necessary SDKs for your development environment.
  3. Authenticate with both APIs:
# Shopify Authentication
shopify.Session.setup(api_key=API_KEY, secret=SHARED_SECRET)
session = shopify.Session(shop_url, API_VERSION, token)

# QuickBooks Authentication
realm_id = "YOUR_REALM_ID"
access_token = "YOUR_ACCESS_TOKEN"
client = QuickBooks(
  1. Fetch data from Shopify:
orders = shopify.Order.find()
  1. Transform the data to match QuickBooks format:
qb_orders = []
for order in orders:
    qb_order = {
        "Line": [
                "Amount": order.total_price,
                "DetailType": "SalesItemLineDetail",
                "SalesItemLineDetail": {
                    "ItemRef": {
                        "value": "1",
                        "name": "Services"
        "CustomerRef": {
  1. Push the data to QuickBooks:
for qb_order in qb_orders:
    invoice = Invoice()

Testing and Validation

  1. Verify that data is syncing accurately and completely.
  2. Test various scenarios, such as refunds and discounts.
  3. Ensure the integration handles errors gracefully.
  4. Validate that the integrated data meets your accounting needs.

Alternative Integrations

While Shopify is a popular e-commerce platform, there are several alternatives that also integrate with QuickBooks Online:

  1. Magento: A powerful, open-source e-commerce platform.
  2. Etsy: A marketplace for handmade and vintage items.
  3. WooCommerce: A customizable e-commerce plugin for WordPress.
  4. Amazon: The world’s largest online marketplace.
PlatformEase of IntegrationFeaturesCost


Integrating Shopify with QuickBooks Online is a game-changer for e-commerce businesses. By automating data sync, you can:

  1. Save time and reduce errors
  2. Gain real-time visibility into your finances
  3. Streamline your accounting processes
  4. Make data-driven decisions
  5. Focus on growing your business

Ready to take your e-commerce accounting to the next level? Our team at FastFix247 is here to help. Contact us today for a free consultation on integrating Shopify with QuickBooks Online.


Q: How long does it take to integrate Shopify with QuickBooks Online?
A: The time required for integration varies depending on the complexity of your setup and the method you choose. A native integration can be set up in a few hours, while a custom integration may take several weeks.

Q: Can I integrate Shopify with QuickBooks Desktop?
A: Yes, it is possible to integrate Shopify with QuickBooks Desktop. However, the process is more complex than integrating with QuickBooks Online and may require additional software or custom development.

Q: Will integrating Shopify with QuickBooks Online affect my existing data?
A: No, integrating the two platforms will not alter your existing data. However, it’s always a good idea to back up your data before starting the integration process.

Q: Can I customize the data that syncs between Shopify and QuickBooks Online?
A: Yes, most integration solutions allow you to customize the data mapping between the two systems. This enables you to control which data fields sync and how they are mapped.

Q: What if I encounter issues with the integration?
A: If you run into any problems with the integration, reach out to your integration provider’s support team. They can help troubleshoot issues and ensure the integration is running smoothly.

Integrations for Efficiency

Our experts can help you with accounting and operations automation by integrating your current apps so that your team doesn’t have to waste time on manual data entry.



Toll Free: 800-942-0215